Beyond PCA: A Probabilistic Gram-Schmidt Approach to Feature Extraction

Linear feature extraction at the presence of nonlinear dependencies among the data is a fundamental challenge in unsupervised learning. We propose using a probabilistic Gram-Schmidt (GS) type orthogonalization process in order to detect and map out redundant dimensions. Specifically, by applying the GS process over a family of functions which presumably captures the nonlinear dependencies in the data, we construct a series of covariance matrices that can either be used to identify new large-variance directions, or to remove those dependencies from the principal components. In the former case, we provide information-theoretic guarantees in terms of entropy reduction. In the latter, we prove that under certain assumptions the resulting algorithms detect and remove nonlinear dependencies whenever those dependencies lie in the linear span of the chosen function family. Both proposed methods extract linear features from the data while removing nonlinear redundancies. We provide simulation results on synthetic and real-world datasets which show improved performance over PCA and state-of-the-art linear feature extraction algorithms, both in terms of variance maximization of the extracted features, and in terms of improved performance of classification algorithms. Additionally, our methods are comparable and often outperform the non-linear method of kernel PCA.