Many real-world systems are modelled using complex ordinary differential equations (ODEs). However, the dimensionality of these systems can make them challenging to analyze. Dimensionality reduction techniques like Proper Orthogonal Decomposition (POD) can be used in such cases. However, these reduced order models are susceptible to perturbations in the input. We propose a novel framework that combines machine learning and data assimilation techniques to improving surrogate models to handle perturbations in input data effectively. Through rigorous experiments on dynamical systems modelled on graphs, we demonstrate that our framework substantially improves the accuracy of surrogate models under input perturbations. Furthermore, we evaluate the framework's efficacy on alternative surrogate models, including neural ODEs, and the empirical results consistently show enhanced performance.
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