Immersed finite element methods have been developed as a means to circumvent the costly mesh generation required in conventional finite element analysis. However, the numerical ill-conditioning of the resultant linear system of equations in such methods poses a challenge for iterative solvers. In this work, we focus on the finite cell method (FCM) with adaptive quadrature, adaptive mesh refinement (AMR) and Nitsche's method for the weak imposition of boundary conditions. An adaptive geometric multigrid solver is employed for the discretized problem. We study the influence of the mesh-dependent stabilization parameter in Nitsche's method on the performance of the geometric multigrid solver and its implications for the multilevel setup in general. A global and a local estimate based on generalized eigenvalue problems are used to choose the stabilization parameter. We find that the convergence rate of the solver is significantly affected by the stabilization parameter, the choice of the estimate and how the stabilization parameter is handled in multilevel configurations. The local estimate, computed on each grid, is found to be a robust method and leads to rapid convergence of the geometric multigrid solver.
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