This paper introduces a novel hierarchical Bayesian model specifically designed to address challenges in Inverse Uncertainty Quantification (IUQ) for time-dependent problems in nuclear Thermal Hydraulics (TH) systems. The unique characteristics of time-dependent data, such as high dimensionality and correlation in model outputs requires special attention in the IUQ process. By integrating Gaussian Processes (GP) with Principal Component Analysis (PCA), we efficiently construct surrogate models that effectively handle the complexity of dynamic TH systems. Additionally, we incorporate Neural Network (NN) models for time series regression, enhancing the computational accuracy and facilitating derivative calculations for efficient posterior sampling using the Hamiltonian Monte Carlo Method - No U-Turn Sampler (NUTS). We demonstrate the effectiveness of this hierarchical Bayesian approach using the transient experiments in the PSBT benchmark. Our results show improved estimates of Physical Model Parameters' posterior distributions and a reduced tendency for over-fitting, compared to conventional single-level Bayesian models. This approach offers a promising framework for extending IUQ to more complex, time-dependent problems.
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