Revisiting Silhouette: From Micro to Macro Aggregation

Silhouette coefficient is an established internal clustering evaluation measure that produces a score per data point, assessing the quality of its clustering assignment. To assess the quality of the clustering of the whole dataset, the scores of all the points in the dataset are typically averaged into a single value, a strategy which we call as micro-averaging. As we illustrate in this work, by using a synthetic example, this micro-averaging strategy is sensitive both to cluster imbalance and outliers (background noise). To address these issues, we propose an alternative aggregation strategy, which first averages the silhouette scores at a cluster level and then (macro) averages the scores across the clusters. Based on the same synthetic example, we show that the proposed macro-averaged silhouette score is robust to cluster imbalance and background noise. We have conducted an experimental study showing that our macro-averaged variant provides better estimates of the ground truth number of clusters on several cases compared to the typical micro-averaged score.