Liquid water, besides being fundamental for life on Earth, has long fascinated scientists due to several anomalies. Different hypotheses have been put forward to explain these peculiarities. The most accredited one foresees the presence in the supercooled region of two phases at different densities: the low-density liquid phase and the high-density liquid phase. In our previous work [Faccio et al., J. Mol. Liq. 355 (2022): 118922], we showed that it is possible to identify these two forms in water networks through a computational approach based on molecular dynamics simulation and on the calculation of the total communicability of the associated graph, in which the nodes correspond to water molecules and the edges represent the connections (interactions) between molecules. In this paper, we present a more in-depth investigation of the application of graph-theory based approaches to the analysis of the structure of water networks. In particular, we investigate different connectivity and centrality measures and we report on the use of a variety of global metrics aimed at giving a topological and geometrical characterization of liquid water.
翻译:液态水除了对地球上的生命至关重要之外,还由于若干反常现象而长期吸引科学家。提出了不同的假设来解释这些特殊性。最经认可的假设预测,在超冷区域存在两个不同密度的阶段:低密度液相和高密度液相。在我们以前的工作中[Facccio等人,J.Mol. Liq.355 (2022):118922],我们表明,有可能通过基于分子动态模拟和计算相关图的完全通信性的计算方法确定水网络中的这两种形式。在计算方法中,节点与水分子相对应,边缘代表分子之间的连接(相互作用)。在本文件中,我们更深入地研究了基于图表的理论方法对水网络结构分析的应用。特别是,我们调查不同的连接性和中心度措施,并报告使用各种全球指标对液体进行表层和几何测量。