We study multi-marginal optimal transport (MOT) problems where the underlying cost has a graphical structure. These graphical multi-marginal optimal transport problems have found applications in several domains including traffic flow control and regression problems in the Wasserstein space. MOT problem can be approached through two aspects: a single big MOT problem, or coupled minor OT problems. In this paper, we focus on the latter approach and demonstrate it has efficiency gain from the parallelization. For tree-structured MOT problems, we introduce a novel parallelizable algorithm that significantly reduces computational complexity. Additionally, we adapt this algorithm for general graphs, employing the modified junction trees to enable parallel updates. Our contributions, validated through numerical experiments, offer new avenues for MOT applications and establish benchmarks in computational efficiency.
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