Working with organs and tissue blocks is an essential task in medical environments. In order to prepare specimens for further analysis, wet-bench workers must dissect tissue and collect spatial metadata. The Registration User Interface (RUI) was developed to allow stakeholders in the Human Biomolecular Atlas Program (HuBMAP) to register tissue blocks by size, position, and orientation. The RUI has been used by tissue mapping centers across the HuBMAP consortium to register a total of 45 kidney, spleen, and colon tissue blocks. In this paper, we compare three setups for registering one 3D tissue block object to another 3D reference organ (target) object. The first setup is a 2D Desktop implementation featuring a traditional screen, mouse, and keyboard interface. The remaining setups are both virtual reality (VR) versions of the RUI: VR Tabletop, where users sit at a physical desk; VR Standup, where users stand upright. We ran a user study involving 42 human subjects completing 14 increasingly difficult and then 30 identical tasks and report position accuracy, rotation accuracy, completion time, and satisfaction. We found that while VR Tabletop and VR Standup users are about three times as fast and about a third more accurate in terms of rotation than 2D Desktop users, there are no significant differences for position accuracy. The performance values for the 2D Desktop version (22.6 seconds per task, 5.9 degrees rotation, and 1.32 mm position accuracy) confirm that the 2D Desktop interface is well-suited for registering tissue blocks at a speed and accuracy that meets the needs of experts performing tissue dissection. In addition, the 2D Desktop setup is cheaper, easier to learn, and more practical for wet-bench environments than the VR setups. All three setups were implemented using the Unity game engine, and study materials were made available, alongside videos documenting our setups.
翻译:与器官和组织区块合作是医疗环境中的一项基本任务。 为了准备用于进一步分析的标本, 湿桶工人必须分解组织并收集空间元数据。 注册用户界面( RUI) 的开发是为了让人类生物分子Atlas程序( HuBMAP) 的利益攸关方按照大小、 位置和方向对组织区块进行登记。 HuBMAP财团中的组织绘图中心使用了RUI来登记总共45个肾脏、 脾脏和结肠组织区块。 在本文中, 我们将登记一个 3D 组织区块对象的3个设置比另一个 3D 参考器官( 目标) 对象要比较。 首个设置 2D 桌面接口( RUI), 以传统屏幕、 鼠标和键盘界面界面界面界面界面的2D 实施虚拟现实( VR) ; VR tocktop, 用户站立起来的VR Stepupupupupupupup 。 我们进行了一项用户在2Rtredeal Studiodeal distryal distring a dress distrevle distration lister lister list devent lister lister devent list devent liew list list list list list list list list list list list list list list list list list list list list list list list list list list list list listem list list list list list list list list listeal dia list list dia dia lif list dia list list list listealdaldald lif list list listed list listed listed lid ex ex ex list list list list ex