Artificial intelligence (AI) has been transforming the practice of drug discovery in the past decade. Various AI techniques have been used in a wide range of applications, such as virtual screening and drug design. In this perspective, we first give an overview on drug discovery and discuss related applications, which can be reduced to two major tasks, i.e., molecular property prediction and molecule generation. We then discuss common data resources, molecule representations and benchmark platforms. Furthermore, to summarize the progress in AI-driven drug discovery, we present the relevant AI techniques including model architectures and learning paradigms in the surveyed papers. We expect that the perspective will serve as a guide for researchers who are interested in working at this intersected area of artificial intelligence and drug discovery. We also provide a GitHub repository\footnote{\url{https://github.com/dengjianyuan/Survey_AI_Drug_Discovery}} with the collection of papers and codes, if applicable, as a learning resource, which will be regularly updated.
翻译:过去十年来,人工智能(AI)一直在改变药物发现的做法,在虚拟筛选和药物设计等广泛应用中使用了各种人工智能技术,从这个角度出发,我们首先概述药物发现情况并讨论相关应用,这些应用可以缩减为两大任务,即分子财产预测和分子生成;然后讨论共同数据资源、分子表示和基准平台;此外,为了总结由人工智能驱动的药物发现工作的进展,我们介绍了相关的人工智能技术,包括在所调查的文件中的模型架构和学习范例。我们期望,这一视角将成为有兴趣在这个人工智能和药物发现交叉领域开展工作的研究人员的指南。我们还提供GitHub存放处/foototo@url{https://github.com/dengjianuan/Surrve_AI_Drug_Discouy ⁇ (如果适用的话)作为定期更新的文件和守则的学习资源。