Structural biology aims at characterizing the structural and dynamic properties of biological macromolecules at atomic details. Gaining insight into three dimensional structures of biomolecules and their interactions is critical for understanding the vast majority of cellular processes, with direct applications in health and food sciences. Since 2010, the WeNMR project (www.wenmr.eu) has implemented numerous web-based services to facilitate the use of advanced computational tools by researchers in the field, using the high throughput computing infrastructure provided by EGI. These services have been further developed in subsequent initiatives under H2020 projects and are now operating as Thematic Services in the European Open Science Cloud (EOSC) portal (www.eosc-portal.eu), sending >12 millions of jobs and using around 4000 CPU-years per year. Here we review 10 years of successful e-infrastructure solutions serving a large worldwide community of over 23,000 users to date, providing them with user-friendly, web-based solutions that run complex workflows in structural biology. The current set of active WeNMR portals are described, together with the complex backend machinery that allows distributed computing resources to be harvested efficiently.
翻译:自2010年以来,WENMR项目(www.wenmr.eu)实施了大量网络服务,以便利实地研究人员使用先进的计算工具,使用EGI提供的高流程计算基础设施。这些服务在H2020项目下的后续举措中得到进一步发展,目前作为欧洲开放科学云门户(www.eosc-portal.eu)的专题服务运行,发送超过1 200万个工作,每年使用大约4 000个CPU-年。我们在此审查为全世界超过23,000名用户提供的电子基础设施10年的成功解决方案,为这些用户提供方便的、基于网络的解决方案,这些解决方案在结构生物学上运行复杂的工作流程。我们描述了目前活跃的WENMR门户网站,以及能够有效分配计算机资源的复杂后端机器。